HMMTOP - Prediction of transmembrane helices and topology of proteins (Hungarian Academy of Sciences)
     input format: fasta, pir/nbrf, swissprot id or accession number
     has options to select
     output: html page

HMMTOP - local version
     input format: sequence or accession/GI
     output: html page with prediction and TOPO2 image of prediction

MEMSAT2 - Prediction of transmembrane regions (University College London)
     input format: sequence only
     enter server, select MEMSAT2 from list of prediction methods
     output format: email message containing prediction

MEMSAT (original version - local) - Prediction of transmembrane regions
     input format: sequence or accession/GI number
     output format: html page with prediction and TOPO2 image of prediction

PHDhtm - Advanced page for selecting only transmembrane helices prediction (Columbia University -PredictProtein)
     input format: sequence only
     email address required
     select the PHDhtm option from the type of prediction menu
     output: email message

PRED-TMR - Prediction of Transmembrane regions in proteins (version 1) University of Athens, Greece
     input format: plain text, fasta file, swissprot data
     output format: html page with predicted segments highlighted in sequence

PRED-TMR2 - Prediction of Transmembrane regions in proteins (version 2) University of Athens, Greece
     input format: plain text, fasta file, swissprot data
     output format: html page with predicted segments highlighted in sequence

SOSUI - Prediction of transmembrane regions (TUAT: Tokyo Univ. of Agriculture & Technology)
     input format: sequence only
     output format: html page with hydrophaty plot and helical wheel diagrams of predicted helices

TMAP (single) - KAROLINSKA INSTITUTET (Sweden)
     input format: sequence only
     output: prediction plus downloadable ps file of the results

TMHMM - Prediction of transmembrane helices in proteins (CBS: Denmark)
     input format: fasta
     output: html page with image of predicted locations

TMHMM - local version
     input format: sequence or accession/GI
     output: html page with prediction and TOPO2 image of prediction

TMpred - Prediction of transmembrane regions and protein orientation (EMBnet-CH)
     input format: sequence, swissprot id or accession number, Genbank gi
     output: html or ascii

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