In clockwise order from the top left, the screendump contains the Contig Comparator containing a variety of search results, the Template Plot and Quality Plot, the Contig Editor, and the Traces windows.
In clockwise order from the top left, the screendump contains the main output window (showing the results of a string search), the string search dialogue, a graphical plot of coding likelihood and stop codons, and the scrolling sequence display showing a three phase translation and restriction enzymes.
In clockwise order from the top left, the screendump contains the dotplot containing similarity between two sequences and an alignment, the main menus and output window, the sequence library searching interface, and the scrolled sequence comparator.