Database Syntax Information

The precise syntax of an identifier depends on the source database from which the definition line was obtained.

DATABASE CLASS IDENTIFIER SYNTAX
(GenBank) GenInfo Integrated Database gi|interger
(GenBank) GenInfo Backbone sequence gibbsq bbs|interger
(GenBank) GenInfo Backbone MolType gibbmt bbm|interger
(GenBank) GenInfo Import identifier gim|interger
GenBank gb|accession|locus
EMBL emb|accession|locus
NBRF PIR pir|accession|entry
SWISS-PROT sp|accession|name
DDBJ dbj|accession|locus
PRF prf|accession|name
PDB pdb|entry name (string)|chain id (char)
Patent pat|country|patent number (string)|seq number (interger)
general gnl|database (string)|id (string or number)
other oth|accession|name|release
local lcl|interger or string
not-set ???


 Contact us: Phone: (415) 476-5379
FAX: 502-1755
Email SACS:

Consulting | Training | Resources | Documentation | Links | Contact | Search | New